Under construction
MorPhiC Bulk RNA-seq analytical workflow
- Based on the well-established nf-core/rna-seq pipeline
- Update versions of software, eg. STAR (to be compatible with STARsolo for scRNA-seq)
- Simplify QC steps to expedite data processing
- 10x compatible reference and annotations
- Option to remove chromosome Y reads from BAM and fastq files
- Includes easily ingestible data matrices for downstream analyses
Source code and documentation are publicly available at https://github.com/morphic-bio/Bulk-RNA-seq.