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Under construction

MorPhiC Bulk RNA-seq analytical workflow

  • Based on the well-established nf-core/rna-seq pipeline
  • Update versions of software, eg. STAR (to be compatible with STARsolo for scRNA-seq)
  • Simplify QC steps to expedite data processing
  • 10x compatible reference and annotations
  • Option to remove chromosome Y reads from BAM and fastq files
  • Includes easily ingestible data matrices for downstream analyses

Source code and documentation are publicly available at https://github.com/morphic-bio/Bulk-RNA-seq.